FastQCFastQC Report
quarta 20 nov 2019
chip2.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filenamechip2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27406818
Sequences flagged as poor quality0
Sequence length49
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG92550.035.68095843
GAGATCG126800.035.24982543
CAGATCG114400.033.5266843
AAGATCG44600.025.54834243
CTAGATC81400.015.08111543
AGAGATC140650.012.67174742
TGAGATC144850.011.725471542
ATAGATC87500.011.57269842
ACAGATC157950.010.98438242
GGAGATC87100.010.0461142
TTAGATC93700.09.13198642
CCAGATC123250.08.79154843
CGAGATC36200.08.43337643
GTAGATC57450.07.933550443
CAAGATC75750.07.91850743
CCTAGAT46200.07.817880643
TCAGATC126900.06.96308943
GCTGGCT115550.06.60606343
TGCTGGC119500.06.4975032
TCAACGT91500.06.29702525
Produced by FastQC (version 0.11.5)